Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo-hept-4-ene-1,7-dioate hydrataseA3Q41_RS14620Not AvailableNegative3033775 - 303456028603.2
3,4-dihydroxyphenylacetate 2,3-dioxygenaseA3Q41_RS14625Not AvailableNegative3034595 - 303574643627.0
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseA3Q41_RS14630Not AvailableNegative3035793 - 303732555260.3
gntr family transcriptional regulatorA3Q41_RS14635Not AvailableNegative3037363 - 303803425324.3
fumarylacetoacetate hydrolase family proteinA3Q41_RS14640Not AvailableNegative3038031 - 303952752521.4
fad-binding monooxygenaseA3Q41_RS14645Not AvailablePositive3039655 - 304158070323.0
nad-dependent succinate-semialdehyde dehydrogenaseA3Q41_RS14650Not AvailablePositive3041577 - 304304651685.7
tetr/acrr family transcriptional regulatorA3Q41_RS14655Not AvailablePositive3043276 - 304386321845.6
primary-amine oxidaseA3Q41_RS14660Not AvailablePositive3044002 - 304596071852.4
apc family permeaseA3Q41_RS14665Not AvailablePositive3045953 - 304739249158.7

Displaying genes 2951 – 2960 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.