Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pasta domain-containing proteinA3Q41_RS13685Not AvailableNegative2840938 - 28412199067.67
trimeric intracellular cation channel family proteinA3Q41_RS13690Not AvailablePositive2841334 - 284194821047.3
response regulator transcription factorA3Q41_RS13695Not AvailablePositive2842025 - 284271125538.8
hamp domain-containing sensor histidine kinaseA3Q41_RS13700Not AvailablePositive2842768 - 284416249704.6
trypsin-like peptidase domain-containing proteinA3Q41_RS13710Not AvailablePositive2844263 - 284578650485.2
molybdenum cofactor biosynthesis protein bA3Q41_RS13715Not AvailablePositive2845876 - 284637316513.6
mspa family porinA3Q41_RS13725Not AvailablePositive2847138 - 284793826553.8
hypothetical proteinA3Q41_RS13730Not AvailablePositive2848059 - 284850814810.0
large conductance mechanosensitive channel protein msclA3Q41_RS13735Not AvailableNegative2848617 - 284909316329.7
rcpc/cpab family pilus assembly proteinA3Q41_RS13740Not AvailableNegative2849188 - 284985022668.1

Displaying genes 2761 – 2770 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.