Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
manganese catalase family proteinA3Q41_RS11855Not AvailablePositive2447582 - 244849332541.4
ydiu family proteinA3Q41_RS11860Not AvailableNegative2448563 - 245001151978.2
iclr family transcriptional regulatorA3Q41_RS11865Not AvailableNegative2450147 - 245092628027.8
pdr/vanb family oxidoreductaseA3Q41_RS11870Not AvailableNegative2450985 - 245194734489.7
hypothetical proteinA3Q41_RS11875Not AvailableNegative2451944 - 24521899038.88
aromatic ring-hydroxylating dioxygenase subunit alphaA3Q41_RS11880Not AvailableNegative2452186 - 245325639594.2
nad(p)-dependent alcohol dehydrogenaseA3Q41_RS11885Not AvailableNegative2453390 - 245449337058.6
aldehyde dehydrogenaseA3Q41_RS11890Not AvailableNegative2454527 - 245602352149.9
marr family winged helix-turn-helix transcriptional regulatorA3Q41_RS11895Not AvailablePositive2456184 - 245663916874.4
tetr/acrr family transcriptional regulatorA3Q41_RS11900Not AvailableNegative2456662 - 245727322172.3

Displaying genes 2391 – 2400 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.