Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
decaprenyl-phosphate phosphoribosyltransferaseA3Q41_RS06640Not AvailableNegative1375407 - 137631232263.8
phosphatase pap2 family proteinA3Q41_RS06645Not AvailableNegative1376309 - 137684518444.6
glycosyltransferaseA3Q41_RS06650Not AvailableNegative1376823 - 137873070220.0
udp-galactopyranose mutaseA3Q41_RS06655Not AvailableNegative1378727 - 137995646590.1
precorrin-6a synthase (deacetylating)A3Q41_RS06660Not AvailableNegative1380024 - 138077326594.8
precorrin-4 c(11)-methyltransferaseA3Q41_RS06665Not AvailableNegative1380770 - 138151325801.7
n-acetylmuramoyl-l-alanine amidaseA3Q41_RS06670Not AvailablePositive1381764 - 138395974744.9
cof-type had-iib family hydrolaseA3Q41_RS06675Not AvailableNegative1384038 - 138487429089.4
nadp-dependent oxidoreductaseA3Q41_RS06680Not AvailablePositive1384950 - 138598136130.9
peptide-methionine (s)-s-oxide reductase msraA3Q41_RS06685Not AvailablePositive1386037 - 138654919086.0

Displaying genes 1331 – 1340 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.