Rhodococcoides fascians strain PBTS 2

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians strain PBTS 2 is a Gram-positive bacterium characterized by its cocci shape. This strain possesses a single replicon, which is indicative of its genomic structure. It has been identified as a host-associated organism, specifically associated with Arabidopsis thaliana, a model plant in scientific research. The accession number for this strain is NZ_CP015220.1, which provides a reference for its genetic and genomic information. The association with Arabidopsis thaliana suggests that Rhodococcoides fascians strain PBTS 2 may play a role in plant-microbe interactions, possibly influencing plant growth or health. From a biological and ecological perspective, the relationship between Rhodococcoides fascians strain PBTS 2 and Arabidopsis thaliana could indicate its potential involvement in plant development or response to environmental stressors. Understanding such relationships is crucial for insights into microbial ecology, particularly in the context of agricultural practices and plant health management. Further study into this strain may reveal more about its specific functions and contributions to the plant host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
Strainstrain PBTS 2

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians strain PBTS 2 chromosome, complete genome.

Gene Summary

Adenine Count

910101 bp

Thymine Count

920099 bp

Guanine Count

1678415 bp

Cytosine Count

1670738 bp

Genome Length

5179353 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA3Q41_RS05600Not AvailableNegative1141889 - 11420987131.82
marr family winged helix-turn-helix transcriptional regulatorA3Q41_RS05605Not AvailablePositive1142192 - 114271919669.3
homogentisate 1,2-dioxygenaseA3Q41_RS05610Not AvailablePositive1142791 - 114398444034.6
hypothetical proteinA3Q41_RS05615Not AvailablePositive1143951 - 114476929145.6
fumarylacetoacetaseA3Q41_RS05620Not AvailablePositive1144789 - 114595541894.9
lrp/asnc family transcriptional regulatorA3Q41_RS05625Not AvailableNegative1145962 - 114647418154.8
4-hydroxyphenylpyruvate dioxygenaseA3Q41_RS05630Not AvailablePositive1146637 - 114784244645.7
lrp/asnc family transcriptional regulatorA3Q41_RS05635Not AvailableNegative1147871 - 114835618042.3
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaA3Q41_RS05640Not AvailablePositive1148515 - 114963040317.5
alpha-ketoacid dehydrogenase subunit betaA3Q41_RS05645Not AvailablePositive1149627 - 115063136030.9

Displaying genes 1121 – 1130 of 4891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.