Candidatus Rhodoluna planktonica strain MWH-Dar1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rhodoluna

Description

Candidatus Rhodoluna planktonica strain MWH-Dar1 is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be advantageous for its ecological niche. The strain is cataloged under the accession number NZ_CP015208.1, providing a reference for genomic and taxonomic studies. This organism is notable within its ecological context, as its classification under the genus Candidatus indicates that it may not have been fully cultured or characterized through traditional methods. The single replicon could imply a degree of specialization or adaptation to specific environmental conditions in which it thrives. Understanding the genomic features of Candidatus Rhodoluna planktonica strain MWH-Dar1 can contribute to insights into its role within aquatic ecosystems, particularly regarding its interactions with other microbial communities. By examining its genetic makeup, researchers may uncover its metabolic capabilities and ecological functions, potentially illuminating its contribution to biogeochemical cycles in marine environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRhodoluna
SpeciesCandidatus Rhodoluna planktonica
Strainstrain MWH-Dar1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Rhodoluna planktonica strain MWH-Dar1 chromosome,

Gene Summary

Adenine Count

341427 bp

Thymine Count

341798 bp

Guanine Count

373530 bp

Cytosine Count

367751 bp

Genome Length

1424506 bp

Protein-coding Genes

1350 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdA4Z71_RS05575Not AvailablePositive1119618 - 112063136256.2
riboflavin synthaseA4Z71_RS05580Not AvailablePositive1120631 - 112122721380.8
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiA4Z71_RS05585Not AvailablePositive1121228 - 112246044451.4
6,7-dimethyl-8-ribityllumazine synthaseA4Z71_RS05590Not AvailablePositive1122462 - 112291715443.6
hypothetical proteinA4Z71_RS05595Not AvailablePositive1122920 - 112330013608.4
abc transporter permeaseA4Z71_RS05600Not AvailableNegative1123407 - 112425230497.8
abc transporter permeaseA4Z71_RS05605Not AvailableNegative1124249 - 112509431368.9
abc transporter atp-binding proteinA4Z71_RS05610Not AvailableNegative1125094 - 112602634679.0
hypothetical proteinA4Z71_RS05615Not AvailablePositive1126084 - 112694432209.4
abc transporter atp-binding proteinA4Z71_RS05620Not AvailablePositive1126941 - 112878865147.6

Displaying genes 1121 – 1130 of 1396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.