Piscinibacter gummiphilus strain NS21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Piscinibacter

Description

Piscinibacter gummiphilus strain NS21 is characterized by a single replicon, which suggests a simplified genomic structure typical of certain bacteria. This strain is cataloged under the accession number NZ_CP015118.1, indicating its presence in genetic databases for further study and reference. As a member of the Piscinibacter genus, P. gummiphilus is likely to be involved in aquatic environments, reflecting its name derived from "piscis," meaning fish in Latin. This association suggests a potential role in the microbial communities of water bodies, where it may contribute to nutrient cycling or organic matter degradation. Understanding the traits of Piscinibacter gummiphilus strain NS21 is essential for exploring its ecological functions. The presence of a single replicon might provide insights into its adaptability and evolutionary strategies within aquatic ecosystems. The strain’s genetic information can offer clues about its metabolic pathways and interactions with other microorganisms, highlighting its potential significance in maintaining the health and balance of aquatic habitats. This bacterium could serve as a model organism for studying microbial dynamics in freshwater systems, contributing to our understanding of biodiversity and ecosystem resilience. The investigation of its genetic and physiological traits can further elucidate its role within the complex interactions that define aquatic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusPiscinibacter
SpeciesPiscinibacter gummiphilus
Strainstrain NS21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscinibacter gummiphilus strain NS21


Gene Summary

Adenine Count

970178 bp

Thymine Count

966944 bp

Guanine Count

2234626 bp

Cytosine Count

2226348 bp

Genome Length

6398096 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaA4W93_RS00005Not AvailablePositive198 - 161352584.6
dna polymerase iii subunit betaA4W93_RS00010Not AvailablePositive1849 - 296440833.6
aldo/keto reductaseA4W93_RS00015Not AvailablePositive3104 - 556090675.3
uvrd-helicase domain-containing proteinA4W93_RS00020Not AvailableNegative5781 - 769769540.0
atp-dependent nucleaseA4W93_RS00025Not AvailableNegative7694 - 968272305.4
type i restriction endonuclease subunit rA4W93_RS00030Not AvailableNegative9749 - 12964119820.0
duf4268 domain-containing proteinA4W93_RS00035Not AvailableNegative13006 - 1395335537.4
restriction endonuclease subunit sA4W93_RS00040Not AvailableNegative13950 - 1531149107.8
type i restriction-modification system subunit mA4W93_RS00045Not AvailableNegative15301 - 1687258213.8
hypothetical proteinA4W93_RS00050Not AvailableNegative16928 - 171287128.75

Displaying genes 1 – 10 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.