Piscinibacter gummiphilus strain NS21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Piscinibacter

Description

Piscinibacter gummiphilus strain NS21 is characterized by a single replicon, which suggests a simplified genomic structure typical of certain bacteria. This strain is cataloged under the accession number NZ_CP015118.1, indicating its presence in genetic databases for further study and reference. As a member of the Piscinibacter genus, P. gummiphilus is likely to be involved in aquatic environments, reflecting its name derived from "piscis," meaning fish in Latin. This association suggests a potential role in the microbial communities of water bodies, where it may contribute to nutrient cycling or organic matter degradation. Understanding the traits of Piscinibacter gummiphilus strain NS21 is essential for exploring its ecological functions. The presence of a single replicon might provide insights into its adaptability and evolutionary strategies within aquatic ecosystems. The strain’s genetic information can offer clues about its metabolic pathways and interactions with other microorganisms, highlighting its potential significance in maintaining the health and balance of aquatic habitats. This bacterium could serve as a model organism for studying microbial dynamics in freshwater systems, contributing to our understanding of biodiversity and ecosystem resilience. The investigation of its genetic and physiological traits can further elucidate its role within the complex interactions that define aquatic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusPiscinibacter
SpeciesPiscinibacter gummiphilus
Strainstrain NS21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscinibacter gummiphilus strain NS21 chromosome, complete genome.

Gene Summary

Adenine Count

970178 bp

Thymine Count

966944 bp

Guanine Count

2234626 bp

Cytosine Count

2226348 bp

Genome Length

6398096 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorA4W93_RS22315Not AvailableNegative4880771 - 488157728860.3
propionate catabolism operon regulatory protein prprA4W93_RS22320Not AvailableNegative4881574 - 488345167827.8
hypothetical proteinA4W93_RS30650Not AvailablePositive4883478 - 48836124908.92
methylisocitrate lyaseA4W93_RS22325Not AvailablePositive4883609 - 488451132454.8
2-methylcitrate synthaseA4W93_RS22330Not AvailablePositive4884532 - 488569242208.5
fe/s-dependent 2-methylisocitrate dehydratase acndA4W93_RS22335Not AvailablePositive4885692 - 488828693912.3
2-methylaconitate cis-trans isomerase prpfA4W93_RS22340Not AvailablePositive4888304 - 488949441294.6
response regulator transcription factorA4W93_RS22345Not AvailablePositive4889741 - 489016015375.6
response regulator transcription factorA4W93_RS22350Not AvailablePositive4890246 - 489092624283.1
response regulator transcription factorA4W93_RS22355Not AvailablePositive4891024 - 489175526026.2

Displaying genes 4531 – 4540 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.