Piscinibacter gummiphilus strain NS21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Piscinibacter

Description

Piscinibacter gummiphilus strain NS21 is characterized by a single replicon, which suggests a simplified genomic structure typical of certain bacteria. This strain is cataloged under the accession number NZ_CP015118.1, indicating its presence in genetic databases for further study and reference. As a member of the Piscinibacter genus, P. gummiphilus is likely to be involved in aquatic environments, reflecting its name derived from "piscis," meaning fish in Latin. This association suggests a potential role in the microbial communities of water bodies, where it may contribute to nutrient cycling or organic matter degradation. Understanding the traits of Piscinibacter gummiphilus strain NS21 is essential for exploring its ecological functions. The presence of a single replicon might provide insights into its adaptability and evolutionary strategies within aquatic ecosystems. The strain’s genetic information can offer clues about its metabolic pathways and interactions with other microorganisms, highlighting its potential significance in maintaining the health and balance of aquatic habitats. This bacterium could serve as a model organism for studying microbial dynamics in freshwater systems, contributing to our understanding of biodiversity and ecosystem resilience. The investigation of its genetic and physiological traits can further elucidate its role within the complex interactions that define aquatic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusPiscinibacter
SpeciesPiscinibacter gummiphilus
Strainstrain NS21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscinibacter gummiphilus strain NS21 chromosome, complete genome.

Gene Summary

Adenine Count

970178 bp

Thymine Count

966944 bp

Guanine Count

2234626 bp

Cytosine Count

2226348 bp

Genome Length

6398096 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-specific glutamate dehydrogenaseA4W93_RS15170Not AvailablePositive3391806 - 339314948008.8
hypothetical proteinA4W93_RS15175Not AvailableNegative3393168 - 33933897578.24
d-lactate dehydrogenaseA4W93_RS15180Not AvailableNegative3393443 - 339520964406.3
fmn-dependent l-lactate dehydrogenase llddA4W93_RS15185Not AvailableNegative3395206 - 339634541400.2
transcriptional regulator lldrA4W93_RS15190Not AvailableNegative3396356 - 339715029572.4
l-lactate permeaseA4W93_RS15195Not AvailableNegative3397172 - 339884258978.4
monovalent cation:proton antiporter-2 (cpa2) family proteinA4W93_RS15200Not AvailablePositive3399175 - 340097462658.6
sigma-70 family rna polymerase sigma factorA4W93_RS15205Not AvailablePositive3401092 - 340163120007.2
fecr domain-containing proteinA4W93_RS15210Not AvailablePositive3401628 - 340260235666.7
tonb-dependent siderophore receptorA4W93_RS15215Not AvailablePositive3402729 - 340520988377.2

Displaying genes 3071 – 3080 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.