Piscinibacter gummiphilus strain NS21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Piscinibacter

Description

Piscinibacter gummiphilus strain NS21 is characterized by a single replicon, which suggests a simplified genomic structure typical of certain bacteria. This strain is cataloged under the accession number NZ_CP015118.1, indicating its presence in genetic databases for further study and reference. As a member of the Piscinibacter genus, P. gummiphilus is likely to be involved in aquatic environments, reflecting its name derived from "piscis," meaning fish in Latin. This association suggests a potential role in the microbial communities of water bodies, where it may contribute to nutrient cycling or organic matter degradation. Understanding the traits of Piscinibacter gummiphilus strain NS21 is essential for exploring its ecological functions. The presence of a single replicon might provide insights into its adaptability and evolutionary strategies within aquatic ecosystems. The strain’s genetic information can offer clues about its metabolic pathways and interactions with other microorganisms, highlighting its potential significance in maintaining the health and balance of aquatic habitats. This bacterium could serve as a model organism for studying microbial dynamics in freshwater systems, contributing to our understanding of biodiversity and ecosystem resilience. The investigation of its genetic and physiological traits can further elucidate its role within the complex interactions that define aquatic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusPiscinibacter
SpeciesPiscinibacter gummiphilus
Strainstrain NS21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscinibacter gummiphilus strain NS21 chromosome, complete genome.

Gene Summary

Adenine Count

970178 bp

Thymine Count

966944 bp

Guanine Count

2234626 bp

Cytosine Count

2226348 bp

Genome Length

6398096 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
family 78 glycoside hydrolase catalytic domainA4W93_RS06490Not AvailableNegative1429809 - 143238295669.5
alpha-l-rhamnosidaseA4W93_RS06495Not AvailableNegative1432376 - 143457480608.3
tetr/acrr family transcriptional regulatorA4W93_RS06500Not AvailableNegative1434722 - 143540824967.9
acyl-coa dehydrogenaseA4W93_RS06505Not AvailableNegative1435444 - 143727065613.3
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinA4W93_RS06510Not AvailableNegative1437263 - 143758011053.1
amp-binding proteinA4W93_RS06515Not AvailableNegative1437599 - 143927859845.9
lysr family transcriptional regulatorA4W93_RS06520Not AvailablePositive1439613 - 144062637250.9
fggy family carbohydrate kinaseA4W93_RS06525Not AvailableNegative1440690 - 144205449039.7
l-rhamnose catabolism isomeraseA4W93_RS06530Not AvailableNegative1442047 - 144333646435.7
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseA4W93_RS06535Not AvailableNegative1443356 - 144545275844.7

Displaying genes 1321 – 1330 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.