Piscinibacter gummiphilus strain NS21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Piscinibacter

Description

Piscinibacter gummiphilus strain NS21 is characterized by a single replicon, which suggests a simplified genomic structure typical of certain bacteria. This strain is cataloged under the accession number NZ_CP015118.1, indicating its presence in genetic databases for further study and reference. As a member of the Piscinibacter genus, P. gummiphilus is likely to be involved in aquatic environments, reflecting its name derived from "piscis," meaning fish in Latin. This association suggests a potential role in the microbial communities of water bodies, where it may contribute to nutrient cycling or organic matter degradation. Understanding the traits of Piscinibacter gummiphilus strain NS21 is essential for exploring its ecological functions. The presence of a single replicon might provide insights into its adaptability and evolutionary strategies within aquatic ecosystems. The strain’s genetic information can offer clues about its metabolic pathways and interactions with other microorganisms, highlighting its potential significance in maintaining the health and balance of aquatic habitats. This bacterium could serve as a model organism for studying microbial dynamics in freshwater systems, contributing to our understanding of biodiversity and ecosystem resilience. The investigation of its genetic and physiological traits can further elucidate its role within the complex interactions that define aquatic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusPiscinibacter
SpeciesPiscinibacter gummiphilus
Strainstrain NS21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscinibacter gummiphilus strain NS21 chromosome, complete genome.

Gene Summary

Adenine Count

970178 bp

Thymine Count

966944 bp

Guanine Count

2234626 bp

Cytosine Count

2226348 bp

Genome Length

6398096 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseA4W93_RS06000Not AvailablePositive1323035 - 132370024694.3
amino acid abc transporter atp-binding proteinA4W93_RS06005Not AvailablePositive1323710 - 132444426894.9
dienelactone hydrolase family proteinA4W93_RS06010Not AvailableNegative1324601 - 132547930825.2
helix-turn-helix domain-containing proteinA4W93_RS06015Not AvailableNegative1325586 - 132647033512.9
cold-shock proteinA4W93_RS06020Not AvailableNegative1326667 - 13268767534.9
duf4394 domain-containing proteinA4W93_RS06025Not AvailableNegative1327077 - 132794929769.3
dihydroorotaseA4W93_RS06030Not AvailablePositive1328053 - 132911138268.6
nyn domain-containing proteinA4W93_RS06035Not AvailablePositive1329108 - 133002232707.7
duf3025 domain-containing proteinA4W93_RS06040Not AvailablePositive1330024 - 133078227692.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive1330792 - 1331134Not Available

Displaying genes 1221 – 1230 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.