Thermococcus siculi strain RG-20

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus siculi strain RG-20 is a hyperthermophilic archaeon isolated from hydrothermal vent systems in the Pacific Ocean. This organism is characterized by its Gram-negative cell structure and the presence of flagella, which are essential for its motility in extreme environments. The strain has a single replicon, indicating a streamlined genomic architecture that is often found in extremophiles, allowing for efficient replication and adaptation to its high-temperature habitat. The accession number for this strain is NZ_CP015103.1, which provides a reference for genomic and taxonomic studies. Thermococcus siculi strain RG-20 thrives in the high-temperature environments typical of hydrothermal vents, showcasing the remarkable adaptability of life in extreme conditions. The presence of flagella not only suggests that this organism is capable of movement but also implies potential ecological roles in nutrient cycling or biofilm formation in its habitat. Understanding the traits of Thermococcus siculi strain RG-20 enhances our knowledge of microbial life in extreme environments and may have implications for biotechnology applications, such as bioremediation or bioenergy production.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus siculi
Strainstrain RG-20

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangehyperthermophilic
Habitathydrothermal vent systems; Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus siculi strain RG-20 chromosome, complete genome.

Gene Summary

Adenine Count

453123 bp

Thymine Count

460125 bp

Guanine Count

557583 bp

Cytosine Count

558336 bp

Genome Length

2029167 bp

Protein-coding Genes

2142 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-methyl-2-oxobutanoate hydroxymethyltransferaseA3L11_RS08400Not AvailablePositive1561986 - 156284031816.7
glycosyltransferase family 2 proteinA3L11_RS08405Not AvailablePositive1562841 - 156350925572.0
dmt family transporterA3L11_RS08410Not AvailableNegative1563499 - 156434130023.8
hypothetical proteinA3L11_RS08415Not AvailablePositive1564561 - 156499515888.4
Trna-thrNot AvailableNot AvailablePositive1565054 - 1565130Not Available
phosphatase pap2 family proteinA3L11_RS08425Not AvailableNegative1565171 - 156598630643.9
had family hydrolaseA3L11_RS08430Not AvailablePositive1566094 - 156654015988.3
yigz family proteinA3L11_RS08435Not AvailablePositive1566550 - 156716722511.0
dead/deah box helicaseA3L11_RS08440Not AvailableNegative1567230 - 1569917104051.0
hypothetical proteinA3L11_RS08445Not AvailablePositive1570072 - 157118742145.4

Displaying genes 1691 – 1700 of 2193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.