Thermococcus siculi strain RG-20

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus siculi strain RG-20 is a hyperthermophilic archaeon isolated from hydrothermal vent systems in the Pacific Ocean. This organism is characterized by its Gram-negative cell structure and the presence of flagella, which are essential for its motility in extreme environments. The strain has a single replicon, indicating a streamlined genomic architecture that is often found in extremophiles, allowing for efficient replication and adaptation to its high-temperature habitat. The accession number for this strain is NZ_CP015103.1, which provides a reference for genomic and taxonomic studies. Thermococcus siculi strain RG-20 thrives in the high-temperature environments typical of hydrothermal vents, showcasing the remarkable adaptability of life in extreme conditions. The presence of flagella not only suggests that this organism is capable of movement but also implies potential ecological roles in nutrient cycling or biofilm formation in its habitat. Understanding the traits of Thermococcus siculi strain RG-20 enhances our knowledge of microbial life in extreme environments and may have implications for biotechnology applications, such as bioremediation or bioenergy production.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus siculi
Strainstrain RG-20

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangehyperthermophilic
Habitathydrothermal vent systems; Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus siculi strain RG-20 chromosome, complete genome.

Gene Summary

Adenine Count

453123 bp

Thymine Count

460125 bp

Guanine Count

557583 bp

Cytosine Count

558336 bp

Genome Length

2029167 bp

Protein-coding Genes

2142 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glu-trna(gln) amidotransferase subunit gatdA3L11_RS06665Not AvailableNegative1239850 - 124116949097.3
transcriptional regulatorA3L11_RS06670Not AvailableNegative1241276 - 124156911407.3
trna pseudouridine(54/55) synthase pus10A3L11_RS06675Not AvailablePositive1241615 - 124277543778.9
50s ribosomal protein l21eA3L11_RS06680Not AvailablePositive1242912 - 124320811268.9
rna polymerase rpb4 family proteinA3L11_RS06685Not AvailablePositive1243211 - 124357914737.7
duf655 domain-containing proteinA3L11_RS06690Not AvailablePositive1243646 - 124426624577.9
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaA3L11_RS06695Not AvailablePositive1244263 - 124509331947.0
ferritin-like domain-containing proteinA3L11_RS06700Not AvailableNegative1245074 - 124560120899.7
radical sam proteinA3L11_RS06705Not AvailablePositive1245666 - 124741165073.2
hypothetical proteinA3L11_RS06710Not AvailableNegative1247401 - 124819529544.5

Displaying genes 1341 – 1350 of 2193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.