Thermococcus siculi strain RG-20

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus siculi strain RG-20 is a hyperthermophilic archaeon isolated from hydrothermal vent systems in the Pacific Ocean. This organism is characterized by its Gram-negative cell structure and the presence of flagella, which are essential for its motility in extreme environments. The strain has a single replicon, indicating a streamlined genomic architecture that is often found in extremophiles, allowing for efficient replication and adaptation to its high-temperature habitat. The accession number for this strain is NZ_CP015103.1, which provides a reference for genomic and taxonomic studies. Thermococcus siculi strain RG-20 thrives in the high-temperature environments typical of hydrothermal vents, showcasing the remarkable adaptability of life in extreme conditions. The presence of flagella not only suggests that this organism is capable of movement but also implies potential ecological roles in nutrient cycling or biofilm formation in its habitat. Understanding the traits of Thermococcus siculi strain RG-20 enhances our knowledge of microbial life in extreme environments and may have implications for biotechnology applications, such as bioremediation or bioenergy production.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus siculi
Strainstrain RG-20

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangehyperthermophilic
Habitathydrothermal vent systems; Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus siculi strain RG-20 chromosome, complete genome.

Gene Summary

Adenine Count

453123 bp

Thymine Count

460125 bp

Guanine Count

557583 bp

Cytosine Count

558336 bp

Genome Length

2029167 bp

Protein-coding Genes

2142 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding proteinA3L11_RS05225Not AvailablePositive963009 - 96346417618.1
ribonuclease p protein component 3A3L11_RS05230Not AvailablePositive963461 - 96418027247.9
hypothetical proteinA3L11_RS05235Not AvailableNegative964341 - 96502424934.6
tigr00341 family proteinA3L11_RS05240Not AvailablePositive965135 - 96613635851.8
hypothetical proteinA3L11_RS05245Not AvailableNegative966133 - 96657916749.1
nickel-responsive transcriptional regulator nikrA3L11_RS05250Not AvailablePositive966658 - 96707415823.2
amino acid permeaseA3L11_RS05255Not AvailablePositive967085 - 96749514598.2
ribosome rescue protein rqchA3L11_RS05260Not AvailableNegative967492 - 96944475256.3
1,4-alpha-glucan branching proteinA3L11_RS05265Not AvailablePositive969574 - 97159878506.1
p-ii family nitrogen regulatorA3L11_RS05270Not AvailablePositive971657 - 97197411542.2

Displaying genes 1051 – 1060 of 2193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.