Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dctp deaminaseA3L08_RS04845Not AvailablePositive860450 - 86091717692.6
archaeal histone hpkaA3L08_RS04850Not AvailablePositive861255 - 8614587420.05
tigr04013 family b12-binding domain/radical sam domain-containing proteinA3L08_RS04855Not AvailablePositive861529 - 86280348894.9
hypothetical proteinA3L08_RS04860Not AvailablePositive862848 - 86318912345.5
toprim domain-containing proteinA3L08_RS04865Not AvailablePositive863244 - 86364515449.0
dna primase dnagA3L08_RS04870Not AvailablePositive863642 - 86505753146.4
glutamate--trna ligaseA3L08_RS04875Not AvailablePositive865178 - 86689666508.8
sodium-dependent transporterA3L08_RS04880Not AvailableNegative866948 - 86823145656.8
maltodextrin phosphorylaseA3L08_RS04885Not AvailableNegative868356 - 87084896899.1
phosphoenolpyruvate carboxykinase (gtp)A3L08_RS04890Not AvailableNegative870948 - 87282272387.3

Displaying genes 981 – 990 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.