Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseA3L08_RS00300Not AvailableNegative43545 - 4454637494.7
abc transporter substrate-binding proteinA3L08_RS00305Not AvailableNegative44624 - 4679881081.5
lrp/asnc family transcriptional regulatorA3L08_RS00310Not AvailablePositive47024 - 472698898.69
signal recognition particle protein srp19A3L08_RS00315Not AvailableNegative47270 - 4761412958.1
duf257 family proteinA3L08_RS00320Not AvailablePositive47672 - 4831023820.7
trna (adenine-n1)-methyltransferaseA3L08_RS00325Not AvailablePositive48291 - 4905228660.8
hypothetical proteinA3L08_RS00330Not AvailableNegative49036 - 492608028.68
sulfide/dihydroorotate dehydrogenase-like fad/nad-binding proteinA3L08_RS00335Not AvailablePositive49427 - 5030232302.5
nadph-dependent glutamate synthaseA3L08_RS00340Not AvailablePositive50302 - 5174752900.2
helix-turn-helix domain-containing proteinA3L08_RS00345Not AvailableNegative51829 - 5215812571.5

Displaying genes 61 – 70 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.