Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna primase catalytic subunit prisA3L08_RS02740Not AvailableNegative482551 - 48359140715.6
dna primase large subunit prilA3L08_RS02745Not AvailableNegative483584 - 48482547863.4
atpase domain-containing proteinA3L08_RS02750Not AvailablePositive485060 - 48580928192.2
hypothetical proteinA3L08_RS02755Not AvailablePositive485879 - 48704542332.3
tripartite tricarboxylate transporter permeaseA3L08_RS02760Not AvailablePositive487027 - 48815740408.2
duf5748 family proteinA3L08_RS02765Not AvailableNegative488172 - 48848012101.3
class i sam-dependent rrna methyltransferaseA3L08_RS02770Not AvailablePositive488552 - 48974244680.6
methyltransferase domain-containing proteinA3L08_RS02775Not AvailableNegative489828 - 49057127881.0
serpin family proteinA3L08_RS02780Not AvailableNegative490601 - 49186346662.8
m20 family metallo-hydrolaseA3L08_RS02785Not AvailableNegative491946 - 49321447640.0

Displaying genes 551 – 560 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.