Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine aminotransferaseA3L08_RS01855Not AvailablePositive306645 - 30798249633.7
ecf transporter s componentA3L08_RS01860Not AvailablePositive308081 - 30868620926.1
family 4b encapsulin nanocompartment shell proteinA3L08_RS01865Not AvailableNegative308683 - 30896710756.2
deoxyribose-phosphate aldolaseA3L08_RS01870Not AvailableNegative308964 - 30963524309.2
hypothetical proteinA3L08_RS01875Not AvailableNegative309726 - 31005212690.2
cgp-cterm-anchored cys-rich proteinA3L08_RS01880Not AvailableNegative310083 - 31130044134.7
phosphopyruvate hydrataseA3L08_RS01885Not AvailablePositive311415 - 31270746702.7
padr family transcriptional regulatorA3L08_RS01890Not AvailableNegative312688 - 31318519272.6
mmpl family transporterA3L08_RS01895Not AvailablePositive313319 - 317437149325.0
radical sam proteinA3L08_RS01900Not AvailablePositive317526 - 31836231826.0

Displaying genes 371 – 380 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.