Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-pyruvoyl trahydropterin synthase family proteinA3L08_RS08565Not AvailableNegative1548974 - 154943517691.0
duf134 domain-containing proteinA3L08_RS08570Not AvailablePositive1549550 - 154990613413.6
adenylosuccinate lyaseA3L08_RS08575Not AvailableNegative1551679 - 155303451242.2
dna-binding protein albaA3L08_RS08580Not AvailablePositive1553209 - 155348410106.3
winged helix-turn-helix domain-containing proteinA3L08_RS08585Not AvailablePositive1553585 - 155426524450.1
cyclic nucleotide-binding/cbs domain-containing proteinA3L08_RS08590Not AvailablePositive1554315 - 155484819733.8
ntpaseA3L08_RS08595Not AvailableNegative1554838 - 155538019960.7
s-methyl-5-thioribose-1-phosphate isomeraseA3L08_RS08600Not AvailablePositive1555435 - 155650839788.2
type ii toxin-antitoxin system vapc family toxinA3L08_RS10320Not AvailableNegative1556492 - 15567228455.44
hypothetical proteinA3L08_RS10225Not AvailableNegative1556935 - 15570634705.83

Displaying genes 1741 – 1750 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.