Thermococcus pacificus strain P-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus pacificus strain P-4 is a Gram-negative archaeon characterized by its presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The specific accession number for this strain is NZ_CP015102.1, which provides a reference for genomic studies and further research. As a member of the genus Thermococcus, T. pacificus strain P-4 is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella is significant for its ecological role, as it enables effective movement toward favorable conditions and nutrient sources in its environment. This motility may also play a crucial role in its interactions with other microorganisms and its ability to colonize specific niches within these extreme habitats. The unique traits of Thermococcus pacificus strain P-4 highlight its adaptability and ecological significance in thermophilic ecosystems. Understanding its genomic structure and motility mechanisms may provide insights into the survival strategies of extremophiles and their contributions to biogeochemical processes in high-temperature environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus pacificus
Strainstrain P-4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus pacificus strain P-4 chromosome, complete genome.

Gene Summary

Adenine Count

408373 bp

Thymine Count

408737 bp

Guanine Count

485297 bp

Cytosine Count

483266 bp

Genome Length

1785673 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit a''A3L08_RS05050Not AvailablePositive904427 - 90560243897.5
50s ribosomal protein l30eA3L08_RS05055Not AvailablePositive905616 - 90592110936.5
nusa-like transcription termination signal-binding factorA3L08_RS05060Not AvailablePositive905921 - 90635816254.3
30s ribosomal protein s12A3L08_RS05065Not AvailablePositive906369 - 90681216422.4
30s ribosomal protein s7A3L08_RS05070Not AvailablePositive906818 - 90746524392.8
alkaline phosphatase family proteinA3L08_RS05075Not AvailableNegative907570 - 90868842024.4
type ii toxin-antitoxin system pemk/mazf family toxinA3L08_RS05080Not AvailableNegative908685 - 90902012397.3
hypothetical proteinA3L08_RS05085Not AvailableNegative909017 - 9092147972.52
nre family dna repair proteinA3L08_RS05090Not AvailableNegative909281 - 91054948680.1
Trna-cysNot AvailableNot AvailablePositive910872 - 910946Not Available

Displaying genes 1021 – 1030 of 2007 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.