Thermococcus barossii strain SHCK-94

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus barossii strain SHCK-94 is a Gram-negative archaeon primarily found in hydrothermal vent systems in the Pacific Ocean. This extremophilic microorganism thrives in high-temperature environments, characteristic of hydrothermal vents, which are rich in chemical nutrients. One notable feature of T. barossii SHCK-94 is the presence of flagella, which facilitates motility in its aquatic habitat. The organism possesses a single replicon, indicating a streamlined genomic architecture, which is often advantageous for survival in extreme conditions. The accession number for T. barossii strain SHCK-94 is NZ_CP015101.1, which provides a reference for genetic and genomic studies. Understanding the genetic makeup of this strain can offer insights into its metabolic pathways and adaptations to the extreme environments of hydrothermal vents. In terms of ecological significance, T. barossii may play a crucial role in the biogeochemical cycles within these unique ecosystems. By participating in nutrient cycling and possibly influencing microbial community dynamics, this archaeon contributes to the overall functioning of hydrothermal vent habitats. The study of such extremophiles can enhance our understanding of life in extreme conditions and the potential for similar life forms elsewhere in the universe.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus barossii
Strainstrain SHCK-94

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathydrothermal vent systems in the Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus barossii strain SHCK-94 chromosome, complete genome.

Gene Summary

Adenine Count

436031 bp

Thymine Count

434973 bp

Guanine Count

526886 bp

Cytosine Count

524528 bp

Genome Length

1922421 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf126 domain-containing proteinA3L01_RS03285Not AvailableNegative591734 - 59212613446.5
aconitase x catalytic domain-containing proteinA3L01_RS03290Not AvailableNegative592136 - 59329642239.4
hypothetical proteinA3L01_RS03295Not AvailablePositive593495 - 59388414600.9
hypothetical proteinA3L01_RS03300Not AvailablePositive593892 - 59460526531.1
Trna-metNot AvailableNot AvailablePositive594715 - 594792Not Available
laglidadg family homing endonucleaseA3L01_RS03310Not AvailablePositive594901 - 59591438449.4
30s ribosomal protein s15A3L01_RS03315Not AvailablePositive595883 - 59633817442.7
dhha1 domain-containing proteinA3L01_RS03320Not AvailablePositive596367 - 59779452523.7
keops complex subunit pcc1A3L01_RS03325Not AvailablePositive597784 - 5980449540.42
30s ribosomal protein s3aeA3L01_RS03330Not AvailablePositive598060 - 59866223149.3

Displaying genes 661 – 670 of 2091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.