Thermococcus barossii strain SHCK-94

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus barossii strain SHCK-94 is a Gram-negative archaeon primarily found in hydrothermal vent systems in the Pacific Ocean. This extremophilic microorganism thrives in high-temperature environments, characteristic of hydrothermal vents, which are rich in chemical nutrients. One notable feature of T. barossii SHCK-94 is the presence of flagella, which facilitates motility in its aquatic habitat. The organism possesses a single replicon, indicating a streamlined genomic architecture, which is often advantageous for survival in extreme conditions. The accession number for T. barossii strain SHCK-94 is NZ_CP015101.1, which provides a reference for genetic and genomic studies. Understanding the genetic makeup of this strain can offer insights into its metabolic pathways and adaptations to the extreme environments of hydrothermal vents. In terms of ecological significance, T. barossii may play a crucial role in the biogeochemical cycles within these unique ecosystems. By participating in nutrient cycling and possibly influencing microbial community dynamics, this archaeon contributes to the overall functioning of hydrothermal vent habitats. The study of such extremophiles can enhance our understanding of life in extreme conditions and the potential for similar life forms elsewhere in the universe.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus barossii
Strainstrain SHCK-94

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathydrothermal vent systems in the Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus barossii strain SHCK-94 chromosome, complete genome.

Gene Summary

Adenine Count

436031 bp

Thymine Count

434973 bp

Guanine Count

526886 bp

Cytosine Count

524528 bp

Genome Length

1922421 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna methyltransferaseA3L01_RS02830Not AvailableNegative520332 - 52099125311.7
saccharopine dehydrogenase family proteinA3L01_RS02835Not AvailableNegative520969 - 52205740812.0
metallophosphoesteraseA3L01_RS02840Not AvailablePositive522117 - 52269521955.7
hypothetical proteinA3L01_RS02845Not AvailablePositive522695 - 52366937415.4
nol1/nop2/sun family putative rna methylaseA3L01_RS02850Not AvailableNegative523666 - 52459535116.6
hypothetical proteinA3L01_RS02855Not AvailableNegative524678 - 52554434026.7
ornithine carbamoyltransferaseA3L01_RS02860Not AvailableNegative525706 - 52665335020.1
duf996 domain-containing proteinA3L01_RS02865Not AvailablePositive526887 - 52742018528.3
duf996 domain-containing proteinA3L01_RS02870Not AvailablePositive527520 - 52817624079.5
fad-dependent thymidylate synthaseA3L01_RS02875Not AvailablePositive528268 - 52901729080.4

Displaying genes 571 – 580 of 2091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.