Thermococcus barossii strain SHCK-94

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus barossii strain SHCK-94 is a Gram-negative archaeon primarily found in hydrothermal vent systems in the Pacific Ocean. This extremophilic microorganism thrives in high-temperature environments, characteristic of hydrothermal vents, which are rich in chemical nutrients. One notable feature of T. barossii SHCK-94 is the presence of flagella, which facilitates motility in its aquatic habitat. The organism possesses a single replicon, indicating a streamlined genomic architecture, which is often advantageous for survival in extreme conditions. The accession number for T. barossii strain SHCK-94 is NZ_CP015101.1, which provides a reference for genetic and genomic studies. Understanding the genetic makeup of this strain can offer insights into its metabolic pathways and adaptations to the extreme environments of hydrothermal vents. In terms of ecological significance, T. barossii may play a crucial role in the biogeochemical cycles within these unique ecosystems. By participating in nutrient cycling and possibly influencing microbial community dynamics, this archaeon contributes to the overall functioning of hydrothermal vent habitats. The study of such extremophiles can enhance our understanding of life in extreme conditions and the potential for similar life forms elsewhere in the universe.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus barossii
Strainstrain SHCK-94

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathydrothermal vent systems in the Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus barossii strain SHCK-94 chromosome, complete genome.

Gene Summary

Adenine Count

436031 bp

Thymine Count

434973 bp

Guanine Count

526886 bp

Cytosine Count

524528 bp

Genome Length

1922421 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2206 domain-containing proteinA3L01_RS10255Not AvailablePositive1895823 - 189751164092.4
glycosyltransferase family 2 proteinA3L01_RS10260Not AvailableNegative1897484 - 189853640501.4
ig-like domain repeat proteinA3L01_RS10265Not AvailablePositive1898759 - 1905397238187.0
ig-like domain repeat proteinA3L01_RS10270Not AvailablePositive1905400 - 190624229432.8
sulfatase-like hydrolase/transferaseA3L01_RS10275Not AvailablePositive1906343 - 190767151119.6
gdp-mannose 4,6-dehydrataseA3L01_RS10280Not AvailableNegative1907691 - 190892046592.4
dtdp-4-dehydrorhamnose reductaseA3L01_RS10285Not AvailableNegative1908904 - 190981533911.9
dtdp-4-dehydrorhamnose 3,5-epimeraseA3L01_RS10290Not AvailableNegative1909825 - 191038221631.8
dtdp-glucose 4,6-dehydrataseA3L01_RS10295Not AvailableNegative1910385 - 191138638489.1
glucose-1-phosphate thymidylyltransferaseA3L01_RS10300Not AvailableNegative1911396 - 191245439416.7

Displaying genes 2071 – 2080 of 2091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.