Thermococcus barossii strain SHCK-94

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus barossii strain SHCK-94 is a Gram-negative archaeon primarily found in hydrothermal vent systems in the Pacific Ocean. This extremophilic microorganism thrives in high-temperature environments, characteristic of hydrothermal vents, which are rich in chemical nutrients. One notable feature of T. barossii SHCK-94 is the presence of flagella, which facilitates motility in its aquatic habitat. The organism possesses a single replicon, indicating a streamlined genomic architecture, which is often advantageous for survival in extreme conditions. The accession number for T. barossii strain SHCK-94 is NZ_CP015101.1, which provides a reference for genetic and genomic studies. Understanding the genetic makeup of this strain can offer insights into its metabolic pathways and adaptations to the extreme environments of hydrothermal vents. In terms of ecological significance, T. barossii may play a crucial role in the biogeochemical cycles within these unique ecosystems. By participating in nutrient cycling and possibly influencing microbial community dynamics, this archaeon contributes to the overall functioning of hydrothermal vent habitats. The study of such extremophiles can enhance our understanding of life in extreme conditions and the potential for similar life forms elsewhere in the universe.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus barossii
Strainstrain SHCK-94

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathydrothermal vent systems in the Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus barossii strain SHCK-94 chromosome, complete genome.

Gene Summary

Adenine Count

436031 bp

Thymine Count

434973 bp

Guanine Count

526886 bp

Cytosine Count

524528 bp

Genome Length

1922421 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gbsr/marr family transcriptional regulatorA3L01_RS08965Not AvailableNegative1629391 - 162991219906.1
hydrophobe/amphiphile efflux-3 (hae3) family transporterA3L01_RS08970Not AvailablePositive1630032 - 163229983774.5
cog1361 s-layer family proteinA3L01_RS08975Not AvailablePositive1632296 - 163466586248.5
lea type 2 family proteinA3L01_RS08980Not AvailablePositive1634716 - 163563633722.8
duf3201 domain-containing proteinA3L01_RS08985Not AvailablePositive1635679 - 163619720304.2
rsmb/nop family class i sam-dependent rna methyltransferaseA3L01_RS08990Not AvailablePositive1636207 - 163736443508.1
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinA3L01_RS08995Not AvailablePositive1637367 - 163839238506.0
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinA3L01_RS09000Not AvailablePositive1638432 - 163951740041.0
nad(+) kinaseA3L01_RS09005Not AvailablePositive1639514 - 164035031324.3
duf835 domain-containing proteinA3L01_RS09010Not AvailableNegative1640334 - 164112229442.2

Displaying genes 1811 – 1820 of 2091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.