Thermococcus barossii strain SHCK-94

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus barossii strain SHCK-94 is a Gram-negative archaeon primarily found in hydrothermal vent systems in the Pacific Ocean. This extremophilic microorganism thrives in high-temperature environments, characteristic of hydrothermal vents, which are rich in chemical nutrients. One notable feature of T. barossii SHCK-94 is the presence of flagella, which facilitates motility in its aquatic habitat. The organism possesses a single replicon, indicating a streamlined genomic architecture, which is often advantageous for survival in extreme conditions. The accession number for T. barossii strain SHCK-94 is NZ_CP015101.1, which provides a reference for genetic and genomic studies. Understanding the genetic makeup of this strain can offer insights into its metabolic pathways and adaptations to the extreme environments of hydrothermal vents. In terms of ecological significance, T. barossii may play a crucial role in the biogeochemical cycles within these unique ecosystems. By participating in nutrient cycling and possibly influencing microbial community dynamics, this archaeon contributes to the overall functioning of hydrothermal vent habitats. The study of such extremophiles can enhance our understanding of life in extreme conditions and the potential for similar life forms elsewhere in the universe.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus barossii
Strainstrain SHCK-94

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathydrothermal vent systems in the Pacific Ocean
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus barossii strain SHCK-94 chromosome, complete genome.

Gene Summary

Adenine Count

436031 bp

Thymine Count

434973 bp

Guanine Count

526886 bp

Cytosine Count

524528 bp

Genome Length

1922421 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA3L01_RS07275Not AvailablePositive1330951 - 133253158756.1
ribose 1,5-bisphosphate isomeraseA3L01_RS07280Not AvailableNegative1332598 - 133356636099.8
plp-dependent aminotransferase family proteinA3L01_RS07285Not AvailablePositive1333805 - 133506147366.7
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinA3L01_RS07290Not AvailablePositive1335127 - 133599332355.7
spl family radical sam proteinA3L01_RS07295Not AvailableNegative1335920 - 133676232572.8
osmc family proteinA3L01_RS07300Not AvailablePositive1336821 - 133722815296.6
neutral amino acid naat transporter snataA3L01_RS07305Not AvailablePositive1337268 - 133790922956.0
hypothetical proteinA3L01_RS07315Not AvailablePositive1338451 - 133905922573.9
family 4a encapsulin nanocompartment shell proteinA3L01_RS07320Not AvailablePositive1339119 - 133940010370.5
triphosphoribosyl-dephospho-coa synthaseA3L01_RS07325Not AvailableNegative1339384 - 134031034833.5

Displaying genes 1471 – 1480 of 2091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.