Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Signal recognition particle protein | ARC77_RS09370 | Not Available | Negative | 1772127 - 1773488 | 49790.5 |
| Inner membrane protein ypjd | ARC77_RS09375 | Not Available | Positive | 1773655 - 1774446 | 29263.9 |
| Hlyc/corc family transporter | ARC77_RS09380 | Not Available | Positive | 1774468 - 1775754 | 48075.3 |
| Heat shock protein | ARC77_RS09385 | Not Available | Negative | 1775809 - 1776402 | 21841.2 |
| Dna repair protein recn | ARC77_RS09390 | Not Available | Positive | 1776525 - 1777403 | 32598.3 |
| Dna repair protein recn | ARC77_RS09395 | Not Available | Positive | 1777489 - 1779150 | 61485.2 |
| Outer membrane protein assembly factor bame | ARC77_RS09400 | Not Available | Positive | 1779299 - 1779640 | 12302.8 |
| Rnfh family protein | ARC77_RS09405 | Not Available | Negative | 1779702 - 1779992 | 10790.0 |
| Type ii toxin-antitoxin system toxin rata | ARC77_RS09410 | Not Available | Negative | 1779982 - 1780419 | 16236.6 |
| Ssra-binding protein | ARC77_RS09415 | Not Available | Positive | 1780590 - 1781072 | 18270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





