Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein tonb | ARC77_RS27875 | Not Available | Positive | 5473659 - 5474378 | 26080.6 |
| acyl-coa thioester hydrolase ycia | ARC77_RS27880 | Not Available | Negative | 5474418 - 5474816 | 14217.3 |
| septation protein a | ARC77_RS27885 | Not Available | Negative | 5474921 - 5475460 | 20791.3 |
| ycic family protein | ARC77_RS27890 | Not Available | Negative | 5475490 - 5476233 | 26402.5 |
| duf1441 family protein | ARC77_RS33185 | Not Available | Negative | 5476261 - 5476350 | 3293.04 |
| outer membrane protein ompw | ARC77_RS27895 | Not Available | Positive | 5476590 - 5477228 | 22924.2 |
| hypothetical protein | ARC77_RS33970 | Not Available | Positive | 147 - 308 | 5917.05 |
| is66 family insertion sequence element accessory protein tnpb | ARC77_RS28460 | Not Available | Positive | 305 - 652 | 12771.9 |
| is66-like element isec8 family transposase | ARC77_RS28465 | Not Available | Positive | 702 - 2240 | 57746.1 |
| is3 family transposase | ARC77_RS28470 | Not Available | Negative | 2355 - 2441 | 3192.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





