Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter substrate-binding protein oppa | ARC77_RS27825 | Not Available | Positive | 5463751 - 5465382 | 60979.1 |
| oligopeptide abc transporter permease oppb | ARC77_RS27830 | Not Available | Positive | 5465468 - 5466388 | 33445.3 |
| oligopeptide abc transporter permease oppc | ARC77_RS27835 | Not Available | Positive | 5466403 - 5467311 | 33023.9 |
| murein tripeptide/oligopeptide abc transporter atp-binding protein oppd | ARC77_RS27840 | Not Available | Positive | 5467323 - 5468336 | 37167.7 |
| murein tripeptide/oligopeptide abc transporter atp-binding protein oppf | ARC77_RS27845 | Not Available | Positive | 5468333 - 5469337 | 37183.8 |
| hi1450 family dsdna-mimic protein | ARC77_RS27850 | Not Available | Negative | 5469390 - 5469719 | 12687.7 |
| cardiolipin synthase | ARC77_RS27855 | Not Available | Negative | 5469754 - 5471214 | 54792.5 |
| yciy family protein | ARC77_RS33180 | Not Available | Positive | 5471357 - 5471530 | 7102.81 |
| voltage-gated potassium channel protein | ARC77_RS27865 | Not Available | Negative | 5471585 - 5472838 | 46080.2 |
| ycii family protein | ARC77_RS27870 | Not Available | Negative | 5473139 - 5473435 | 10602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





