Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | ARC77_RS27780 | Not Available | Negative | 5452552 - 5453394 | 31938.6 |
| ychj family protein | ARC77_RS27785 | Not Available | Negative | 5453444 - 5453902 | 16973.2 |
| patatin-like phospholipase rssa | ARC77_RS27790 | Not Available | Positive | 5454015 - 5454920 | 33041.0 |
| two-component system response regulator rssb | ARC77_RS27795 | Not Available | Positive | 5455012 - 5456025 | 37304.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | ARC77_RS27800 | Not Available | Positive | 5456227 - 5457135 | 32944.2 |
| histone-like nucleoid-structuring protein h-ns | ARC77_RS27805 | Not Available | Negative | 5457279 - 5457692 | 15540.5 |
| thymidine kinase | ARC77_RS27810 | Not Available | Positive | 5458296 - 5458913 | 23399.9 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | ARC77_RS27815 | Not Available | Negative | 5459214 - 5461889 | 96132.5 |
| protein ycht | ARC77_RS33650 | Not Available | Positive | 5462282 - 5462335 | 1882.42 |
| naat family transporter yche | ARC77_RS27820 | Not Available | Positive | 5462366 - 5463013 | 23488.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





