Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | ARC77_RS27460 | Not Available | Positive | 5386887 - 5387333 | 17329.5 |
| hemolysin hlye | ARC77_RS27465 | Not Available | Negative | 5387540 - 5388451 | 33718.2 |
| translesion error-prone dna polymerase v autoproteolytic subunit | ARC77_RS27470 | Not Available | Positive | 5388824 - 5389243 | 15064.2 |
| dna polymerase v catalytic protein | ARC77_RS27475 | Not Available | Positive | 5389243 - 5390511 | 47670.4 |
| disulfide bond formation protein dsbb | ARC77_RS27480 | Not Available | Negative | 5390557 - 5391087 | 20143.3 |
| na(+)/h(+) antiporter nhab | ARC77_RS27485 | Not Available | Negative | 5391233 - 5392774 | 56761.8 |
| fatty acid metabolism transcriptional regulator fadr | ARC77_RS27490 | Not Available | Positive | 5392996 - 5393715 | 26970.2 |
| spovr family protein | ARC77_RS27495 | Not Available | Negative | 5393767 - 5395299 | 60803.1 |
| d-amino acid dehydrogenase | ARC77_RS27500 | Not Available | Positive | 5395662 - 5396960 | 47610.1 |
| catabolic alanine racemase dadx | ARC77_RS27505 | Not Available | Positive | 5396970 - 5398040 | 38861.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





