Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | ARC77_RS25460 | Not Available | Negative | 5036081 - 5038099 | 77429.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | ARC77_RS25465 | Not Available | Negative | 5038108 - 5040531 | 92211.9 |
| ggdef domain-containing protein | ARC77_RS25470 | Not Available | Positive | 5041118 - 5042476 | 51644.4 |
| eal domain-containing protein | ARC77_RS25475 | Not Available | Positive | 5042574 - 5044184 | 60797.1 |
| hypothetical protein | ARC77_RS25480 | Not Available | Negative | 5044286 - 5044777 | 18996.6 |
| transcriptional regulator | ARC77_RS25485 | Not Available | Negative | 5044782 - 5045594 | 30959.5 |
| sdr family oxidoreductase | ARC77_RS25490 | Not Available | Positive | 5046282 - 5047064 | 28598.5 |
| molecular chaperone | ARC77_RS25495 | Not Available | Negative | 5047210 - 5047899 | 25778.9 |
| fimbrial protein | ARC77_RS25500 | Not Available | Negative | 5047896 - 5049230 | 46894.1 |
| duf1441 family protein | ARC77_RS25505 | Not Available | Negative | 5049246 - 5051769 | 89624.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





