Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule biosynthesis gfcc family protein | ARC77_RS25265 | Not Available | Negative | 4995075 - 4995821 | 27278.6 |
| lipoprotein gfcb | ARC77_RS25270 | Not Available | Negative | 4995818 - 4996462 | 24249.9 |
| threonine-rich inner membrane protein gfca | ARC77_RS25275 | Not Available | Negative | 4996569 - 4996874 | 9447.98 |
| cold shock-like protein csph | ARC77_RS25280 | Not Available | Negative | 4997316 - 4997528 | 7720.48 |
| cold shock protein cspg | ARC77_RS25285 | Not Available | Positive | 4997814 - 4998026 | 7781.14 |
| cold-shock protein | ARC77_RS30805 | Not Available | Positive | 4998037 - 4998225 | 7104.55 |
| protein ymce | ARC77_RS25290 | Not Available | Positive | 4998200 - 4998430 | 8683.6 |
| gnsa/gnsb family addiction module toxin | ARC77_RS30810 | Not Available | Positive | 4998458 - 4998592 | 5049.2 |
| 4fe-4s binding protein | ARC77_RS25295 | Not Available | Negative | 4998641 - 4999714 | 40034.3 |
| tmao reductase system sensor histidine kinase/response regulator tors | ARC77_RS25300 | Not Available | Negative | 4999786 - 5002530 | 100852.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





