Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | ARC77_RS25215 | Not Available | Positive | 4983473 - 4983871 | 14950.7 |
| hydrogenase expression/formation protein | ARC77_RS25220 | Not Available | Positive | 4983868 - 4984725 | 31530.7 |
| cytochrome bd-ii oxidase subunit 1 | ARC77_RS25225 | Not Available | Positive | 4984859 - 4986403 | 58056.4 |
| cytochrome d ubiquinol oxidase subunit ii | ARC77_RS25230 | Not Available | Positive | 4986415 - 4987551 | 42443.3 |
| cytochrome bd-ii oxidase subunit cbdx | ARC77_RS25235 | Not Available | Positive | 4987564 - 4987656 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | ARC77_RS25240 | Not Available | Positive | 4987736 - 4989040 | 47339.8 |
| tyrosine-protein kinase | ARC77_RS25245 | Not Available | Negative | 4989160 - 4991340 | 81264.5 |
| protein-tyrosine-phosphatase etp | ARC77_RS25250 | Not Available | Negative | 4991360 - 4991806 | 16386.9 |
| polysaccharide export protein | ARC77_RS25255 | Not Available | Negative | 4991794 - 4992933 | 41743.2 |
| yjbh domain-containing protein | ARC77_RS25260 | Not Available | Negative | 4992979 - 4995075 | 78675.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





