Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muropeptide mfs transporter ampg | ARC77_RS21840 | Not Available | Negative | 4285960 - 4287435 | 53248.3 |
| lipoprotein | ARC77_RS21845 | Not Available | Negative | 4287479 - 4288057 | 20979.3 |
| transcriptional regulator bola | ARC77_RS21850 | Not Available | Positive | 4288362 - 4288679 | 11994.3 |
| trigger factor | ARC77_RS21860 | Not Available | Positive | 4289023 - 4290321 | 48195.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | ARC77_RS21865 | Not Available | Positive | 4290566 - 4291189 | 23188.1 |
| atp-dependent protease atp-binding subunit clpx | ARC77_RS21870 | Not Available | Positive | 4291315 - 4292589 | 46358.7 |
| endopeptidase la | ARC77_RS21875 | Not Available | Positive | 4292777 - 4295131 | 87442.4 |
| nucleoid-associated protein hu-beta | ARC77_RS21880 | Not Available | Positive | 4295340 - 4295612 | 9226.08 |
| peptidylprolyl isomerase | ARC77_RS21885 | Not Available | Positive | 4295804 - 4297675 | 68153.7 |
| helix-hairpin-helix domain-containing protein | ARC77_RS21890 | Not Available | Positive | 4297826 - 4298197 | 12717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





