Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaii/yqxd family protein | ARC77_RS21580 | Not Available | Positive | 4233379 - 4233837 | 16970.4 |
| shikimate kinase arol | ARC77_RS21585 | Not Available | Positive | 4234020 - 4234544 | 19151.9 |
| protein yaia | ARC77_RS21590 | Not Available | Positive | 4234594 - 4234785 | 7281.55 |
| arom family protein | ARC77_RS21600 | Not Available | Positive | 4235043 - 4235720 | 24900.4 |
| pyrimidine/purine nucleoside phosphorylase | ARC77_RS21605 | Not Available | Positive | 4235792 - 4236076 | 10234.9 |
| duf2773 domain-containing protein | ARC77_RS31995 | Not Available | Positive | 4236220 - 4238499 | 86839.8 |
| hypothetical protein | ARC77_RS21615 | Not Available | Positive | 4238496 - 4238945 | 17549.1 |
| recombination-associated protein rdgc | ARC77_RS21620 | Not Available | Negative | 4239030 - 4239941 | 33937.2 |
| fructokinase | ARC77_RS21625 | Not Available | Positive | 4240066 - 4240974 | 32511.6 |
| mfs transporter araj | ARC77_RS21630 | Not Available | Negative | 4241117 - 4242301 | 41929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





