Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system protein kefc | ARC77_RS19565 | Not Available | Positive | 3814772 - 3816634 | 67656.9 |
| type 3 dihydrofolate reductase | ARC77_RS19570 | Not Available | Positive | 3816826 - 3817305 | 17970.3 |
| type ii toxin-antitoxin system ccda family antitoxin | ARC77_RS19575 | Not Available | Positive | 3817391 - 3817624 | 8530.97 |
| ccdb family protein | ARC77_RS19580 | Not Available | Positive | 3817627 - 3817941 | 11712.5 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | ARC77_RS19585 | Not Available | Negative | 3817938 - 3818786 | 31498.6 |
| co2+/mg2+ efflux protein apag | ARC77_RS19590 | Not Available | Negative | 3818793 - 3819170 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ARC77_RS19595 | Not Available | Negative | 3819173 - 3819994 | 30456.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ARC77_RS19600 | Not Available | Negative | 3819991 - 3820980 | 35211.9 |
| peptidylprolyl isomerase sura | ARC77_RS19605 | Not Available | Negative | 3820980 - 3822266 | 47286.5 |
| lps assembly protein lptd | ARC77_RS19610 | Not Available | Negative | 3822319 - 3824673 | 89664.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





