Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication protein dnac | ARC77_RS19075 | Not Available | Negative | 3722750 - 3723487 | 27936.8 |
| primosomal protein dnat | ARC77_RS19080 | Not Available | Negative | 3723490 - 3724029 | 19500.2 |
| threonine/serine exporter | ARC77_RS19085 | Not Available | Negative | 3724136 - 3724609 | 17047.6 |
| threonine/serine exporter thre family protein | ARC77_RS19090 | Not Available | Negative | 3724600 - 3725370 | 28026.6 |
| response regulator transcription factor | ARC77_RS19095 | Not Available | Positive | 3725991 - 3726716 | 27033.6 |
| dna-binding transcriptional activator bglj | ARC77_RS19100 | Not Available | Positive | 3726674 - 3727351 | 25623.1 |
| siderophore-iron reductase fhuf | ARC77_RS19105 | Not Available | Negative | 3727389 - 3728177 | 30127.3 |
| duf1435 domain-containing protein | ARC77_RS19110 | Not Available | Positive | 3728318 - 3728554 | 8709.35 |
| Trna-leu | Not Available | Not Available | Positive | 3728593 - 3728679 | Not Available |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | ARC77_RS19120 | Not Available | Negative | 3728869 - 3729900 | 37603.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





