Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytfj family protein | ARC77_RS18365 | Not Available | Negative | 3555964 - 3556518 | 20495.7 |
| duf1107 domain-containing protein | ARC77_RS18370 | Not Available | Positive | 3556843 - 3557049 | 8072.24 |
| hemolysin family protein | ARC77_RS18375 | Not Available | Negative | 3557128 - 3558471 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | ARC77_RS18380 | Not Available | Negative | 3558794 - 3559432 | 23356.3 |
| autotransporter assembly complex protein tama | ARC77_RS18390 | Not Available | Positive | 3559638 - 3561371 | 64799.7 |
| autotransporter assembly complex protein tamb | ARC77_RS18395 | Not Available | Positive | 3561368 - 3565147 | 136890.0 |
| gamma-glutamylcyclotransferase | ARC77_RS18400 | Not Available | Positive | 3565150 - 3565491 | 12867.2 |
| type ii toxin-antitoxin system antitoxin chps | ARC77_RS18405 | Not Available | Positive | 3565703 - 3565954 | 9300.18 |
| endoribonuclease toxin chpb | ARC77_RS18410 | Not Available | Positive | 3565948 - 3566298 | 12512.2 |
| inorganic diphosphatase | ARC77_RS18415 | Not Available | Negative | 3566378 - 3566908 | 19704.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





