Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ydfc | ARC77_RS01665 | Not Available | Negative | 322627 - 322845 | 8331.87 |
| hypothetical protein | ARC77_RS01670 | Not Available | Negative | 322917 - 323216 | 11226.8 |
| type ii toxin-antitoxin system rele/pare family toxin | ARC77_RS01680 | Not Available | Negative | 323568 - 323846 | 10661.8 |
| hypothetical protein | ARC77_RS01685 | Not Available | Negative | 323848 - 324039 | 7463.87 |
| hypothetical protein | ARC77_RS31385 | Not Available | Negative | 324060 - 324431 | 14259.1 |
| Prophage antirepressor | ARC77_RS01695 | Not Available | Positive | 324529 - 324831 | 10848.9 |
| Cii protein | ARC77_RS01700 | Not Available | Positive | 324828 - 325253 | 16177.6 |
| Replication protein | ARC77_RS01705 | Not Available | Positive | 325276 - 326238 | 35812.4 |
| Dna replication protein | ARC77_RS01710 | Not Available | Positive | 326245 - 326985 | 27703.4 |
| Hypothetical protein | ARC77_RS01720 | Not Available | Positive | 327011 - 327780 | 29481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





