Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsb | ARC77_RS17350 | Not Available | Negative | 3358171 - 3360594 | 91414.9 |
| diacylglycerol kinase | ARC77_RS17355 | Not Available | Positive | 3360765 - 3361133 | 13245.4 |
| transcriptional repressor lexa | ARC77_RS17360 | Not Available | Positive | 3361243 - 3361851 | 22359.1 |
| mate family efflux transporter dinf | ARC77_RS17365 | Not Available | Positive | 3361924 - 3363249 | 47682.0 |
| csbd family protein | ARC77_RS17370 | Not Available | Positive | 3363365 - 3363574 | 8325.67 |
| zinc uptake transcriptional repressor zur | ARC77_RS17375 | Not Available | Negative | 3363616 - 3364131 | 19241.2 |
| duf2713 family protein | ARC77_RS17380 | Not Available | Positive | 3364443 - 3365399 | 36195.0 |
| duf1441 family protein | ARC77_RS30210 | Not Available | Positive | 3365761 - 3365865 | 3961.7 |
| alanine racemase | ARC77_RS17495 | Not Available | Positive | 3380729 - 3381808 | 39197.3 |
| aromatic amino acid transaminase | ARC77_RS17500 | Not Available | Positive | 3382061 - 3383254 | 43507.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





