Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cytr | ARC77_RS16705 | Not Available | Negative | 3214641 - 3215666 | 37822.1 |
| primosomal protein n' | ARC77_RS16710 | Not Available | Negative | 3215822 - 3218020 | 81629.6 |
| 50s ribosomal protein l31 | ARC77_RS16715 | Not Available | Positive | 3218223 - 3218435 | 7871.49 |
| rhs element protein rhsc | ARC77_RS16720 | Not Available | Positive | 3218595 - 3222779 | 157797.0 |
| duf1441 family protein | ARC77_RS16725 | Not Available | Positive | 3222781 - 3223103 | 11766.6 |
| duf1441 family protein | ARC77_RS31895 | Not Available | Negative | 3223190 - 3223865 | 25200.3 |
| yiix family permuted papain-like enzyme | ARC77_RS16750 | Not Available | Negative | 3224010 - 3224618 | 23156.0 |
| met regulon transcriptional regulator metj | ARC77_RS16755 | Not Available | Negative | 3224678 - 3224995 | 12141.4 |
| cystathionine gamma-synthase | ARC77_RS16760 | Not Available | Positive | 3225272 - 3226432 | 41538.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | ARC77_RS16765 | Not Available | Positive | 3226435 - 3228867 | 88922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





