Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid biosynthesis protein faby | ARC77_RS16420 | Not Available | Positive | 3163785 - 3164726 | 35339.4 |
| hypothetical protein | ARC77_RS16425 | Not Available | Positive | 3165137 - 3166030 | 33685.4 |
| hypothetical protein | ARC77_RS16430 | Not Available | Positive | 3166037 - 3166951 | 33692.8 |
| copg family transcriptional regulator | ARC77_RS16445 | Not Available | Positive | 3167645 - 3167863 | 8408.23 |
| copg family transcriptional regulator | ARC77_RS16450 | Not Available | Positive | 3168080 - 3168322 | 9325.03 |
| formate dehydrogenase accessory protein fdhe | ARC77_RS16460 | Not Available | Negative | 3168652 - 3169581 | 34690.5 |
| formate dehydrogenase cytochrome b556 subunit | ARC77_RS16465 | Not Available | Negative | 3169578 - 3170213 | 24607.7 |
| formate dehydrogenase o subunit beta | ARC77_RS16470 | Not Available | Negative | 3170210 - 3171112 | 33083.0 |
| formate dehydrogenase-n subunit alpha | ARC77_RS16475 | Not Available | Negative | 3171125 - 3174175 | 112434.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | ARC77_RS16485 | Not Available | Positive | 3174369 - 3175202 | 30461.7 |
Pathways
504 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





