Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence element accessory protein tnpb | ARC77_RS16265 | Not Available | Positive | 3129208 - 3129555 | 12771.9 |
| is66-like element isec8 family transposase | ARC77_RS16270 | Not Available | Positive | 3129605 - 3131143 | 57746.1 |
| acyltransferase | ARC77_RS16275 | Not Available | Negative | 3131339 - 3132271 | 36276.1 |
| dna polymerase i | ARC77_RS16285 | Not Available | Positive | 3132635 - 3135421 | 103152.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | ARC77_RS16290 | Not Available | Negative | 3135803 - 3136435 | 23589.3 |
| duf1441 family protein | ARC77_RS33855 | Not Available | Positive | 3136732 - 3136898 | 6289.25 |
| der gtpase-activating protein yihi | ARC77_RS16295 | Not Available | Positive | 3137017 - 3137523 | 18968.2 |
| oxygen-independent coproporphyrinogen iii oxidase | ARC77_RS16300 | Not Available | Positive | 3137712 - 3139085 | 52732.0 |
| yshb family small membrane protein | ARC77_RS16305 | Not Available | Negative | 3139275 - 3139385 | 3618.45 |
| nitrogen regulation protein nr(i) | ARC77_RS16310 | Not Available | Negative | 3139497 - 3140906 | 52257.9 |
Pathways
644 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





