Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | ARC77_RS16165 | Not Available | Positive | 3108564 - 3110057 | 55650.9 |
| nad(p)h-flavin reductase | ARC77_RS16170 | Not Available | Positive | 3110103 - 3110804 | 26243.5 |
| acetyl-coa c-acyltransferase fada | ARC77_RS16175 | Not Available | Negative | 3110996 - 3112159 | 40843.6 |
| fatty acid oxidation complex subunit alpha fadb | ARC77_RS16180 | Not Available | Negative | 3112169 - 3114358 | 79563.4 |
| xaa-pro dipeptidase | ARC77_RS16185 | Not Available | Positive | 3114548 - 3115879 | 50198.9 |
| impact family protein | ARC77_RS16190 | Not Available | Positive | 3115879 - 3116493 | 21690.0 |
| trk system potassium transporter trkh | ARC77_RS16195 | Not Available | Positive | 3116532 - 3117983 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | ARC77_RS16200 | Not Available | Positive | 3117995 - 3118540 | 21227.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3118921 - 3120462 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3120531 - 3120607 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





