Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | ARC77_RS16115 | Not Available | Positive | 3100007 - 3100768 | 27151.7 |
| dna recombination protein rmuc | ARC77_RS16120 | Not Available | Positive | 3100909 - 3102336 | 54767.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | ARC77_RS16125 | Not Available | Positive | 3102431 - 3103186 | 28074.8 |
| ubiquinone biosynthesis protein ubij | ARC77_RS16130 | Not Available | Positive | 3103200 - 3103805 | 22077.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | ARC77_RS16135 | Not Available | Positive | 3103802 - 3105442 | 63206.4 |
| sec-independent protein translocase subunit tata | ARC77_RS16140 | Not Available | Positive | 3105521 - 3105790 | 9664.5 |
| sec-independent protein translocase protein tatb | ARC77_RS16145 | Not Available | Positive | 3105794 - 3106309 | 18421.8 |
| sec-independent protein translocase subunit tatc | ARC77_RS16150 | Not Available | Positive | 3106312 - 3107088 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | ARC77_RS16155 | Not Available | Positive | 3107130 - 3107912 | 29028.6 |
| transcription/translation regulatory transformer protein rfah | ARC77_RS16160 | Not Available | Negative | 3107909 - 3108397 | 18341.3 |
Pathways
601 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





