Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase rep | ARC77_RS15815 | Not Available | Positive | 3041313 - 3043334 | 77100.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | ARC77_RS15820 | Not Available | Negative | 3043381 - 3044865 | 54874.4 |
| atp-dependent rna helicase rhlb | ARC77_RS15825 | Not Available | Negative | 3045001 - 3046266 | 47068.6 |
| thioredoxin trxa | ARC77_RS15830 | Not Available | Positive | 3046397 - 3046726 | 11807.2 |
| rho operon leader peptide rhol | ARC77_RS15835 | Not Available | Positive | 3046867 - 3046968 | 3750.4 |
| transcription termination factor rho | ARC77_RS15840 | Not Available | Positive | 3047053 - 3048312 | 47007.1 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | ARC77_RS15850 | Not Available | Positive | 3048552 - 3049655 | 40911.6 |
| eca polysaccharide chain length modulation protein | ARC77_RS15855 | Not Available | Positive | 3049667 - 3050713 | 39491.3 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | ARC77_RS15860 | Not Available | Positive | 3050769 - 3051899 | 42250.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | ARC77_RS15865 | Not Available | Positive | 3051896 - 3053158 | 45841.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





