Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide ilvx | ARC77_RS32850 | Not Available | Positive | 3031181 - 3031231 | 1920.29 |
| acetolactate synthase 2 catalytic subunit | ARC77_RS15770 | Not Available | Positive | 3031234 - 3032880 | 59205.2 |
| acetolactate synthase 2 small subunit | ARC77_RS15775 | Not Available | Positive | 3032877 - 3033140 | 9703.74 |
| branched-chain-amino-acid transaminase | ARC77_RS15780 | Not Available | Positive | 3033160 - 3034089 | 34095.6 |
| dihydroxy-acid dehydratase | ARC77_RS15785 | Not Available | Positive | 3034154 - 3036004 | 65579.5 |
| threonine ammonia-lyase, biosynthetic | ARC77_RS15790 | Not Available | Positive | 3036007 - 3037551 | 56187.4 |
| hth-type transcriptional activator ilvy | ARC77_RS15795 | Not Available | Negative | 3037603 - 3038496 | 33220.3 |
| ketol-acid reductoisomerase | ARC77_RS15800 | Not Available | Positive | 3038646 - 3040121 | 54067.1 |
| peptidylprolyl isomerase ppic | ARC77_RS15805 | Not Available | Negative | 3040167 - 3040448 | 10232.6 |
| type ii toxin-antitoxin system pemk/mazf family toxin | ARC77_RS15810 | Not Available | Negative | 3040647 - 3041096 | 16957.5 |
Pathways
891 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





