Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | ARC77_RS15405 | Not Available | Negative | 2954691 - 2955791 | 40589.1 |
| chromosomal replication initiator protein dnaa | ARC77_RS15410 | Not Available | Negative | 2955796 - 2957199 | 52543.7 |
| protein ysdd | ARC77_RS32840 | Not Available | Positive | 2957496 - 2957576 | 3111.7 |
| 50s ribosomal protein l34 | ARC77_RS15415 | Not Available | Positive | 2957806 - 2957946 | 5380.74 |
| ribonuclease p protein component | ARC77_RS15420 | Not Available | Positive | 2957963 - 2958322 | 13789.1 |
| membrane protein insertion efficiency factor yidd | ARC77_RS15425 | Not Available | Positive | 2958286 - 2958543 | 9380.63 |
| membrane protein insertase yidc | ARC77_RS15430 | Not Available | Positive | 2958546 - 2960192 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ARC77_RS15435 | Not Available | Positive | 2960298 - 2961662 | 49205.8 |
| duf1441 family protein | ARC77_RS15445 | Not Available | Negative | 2961812 - 2963981 | 80719.6 |
| tryptophanase leader peptide | ARC77_RS15450 | Not Available | Positive | 2964372 - 2964446 | 2894.56 |
Pathways
1367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





