Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | ARC77_RS15360 | Not Available | Positive | 2945949 - 2946281 | 11796.3 |
| duf3748 domain-containing protein | ARC77_RS15365 | Not Available | Negative | 2946283 - 2947497 | 44994.8 |
| colicin m resistance lipid reductase cbra | ARC77_RS15370 | Not Available | Positive | 2947598 - 2948662 | 40126.5 |
| duf1441 family protein | ARC77_RS33845 | Not Available | Negative | 2948659 - 2948772 | 3857.83 |
| protein yidx | ARC77_RS15375 | Not Available | Positive | 2948908 - 2949564 | 24200.0 |
| sugar-phosphatase | ARC77_RS15380 | Not Available | Negative | 2949610 - 2950422 | 29749.8 |
| yidb family protein | ARC77_RS15385 | Not Available | Negative | 2950537 - 2950935 | 13813.5 |
| duf1441 family protein | ARC77_RS34110 | Not Available | Positive | 2951053 - 2951151 | 3381.14 |
| dna topoisomerase (atp-hydrolyzing) subunit b | ARC77_RS15395 | Not Available | Negative | 2951175 - 2953589 | 89955.0 |
| dna replication/repair protein recf | ARC77_RS15400 | Not Available | Negative | 2953618 - 2954691 | 40516.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





