Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ARC77_RS15255 | Not Available | Negative | 2927598 - 2928251 | 24447.4 |
| acetolactate synthase small subunit | ARC77_RS15260 | Not Available | Negative | 2928514 - 2928804 | 11106.4 |
| acetolactate synthase large subunit | ARC77_RS15265 | Not Available | Negative | 2928808 - 2930496 | 60394.1 |
| ilvb operon leader peptide ivbl | ARC77_RS15270 | Not Available | Negative | 2930602 - 2930700 | 3176.08 |
| type i toxin-antitoxin system toxin tisb | ARC77_RS15285 | Not Available | Positive | 2931265 - 2931354 | 3195.29 |
| protein ysde | ARC77_RS33615 | Not Available | Negative | 2931478 - 2931552 | 2827.45 |
| multidrug efflux mfs transporter emrd | ARC77_RS15290 | Not Available | Positive | 2931634 - 2932818 | 42241.5 |
| radical sam protein | ARC77_RS15295 | Not Available | Negative | 2932826 - 2933323 | 19133.9 |
| duf202 domain-containing protein | ARC77_RS15300 | Not Available | Negative | 2933320 - 2933682 | 13769.1 |
| yidh family protein | ARC77_RS15305 | Not Available | Negative | 2933672 - 2934019 | 12780.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





